Covid-19 lineage circulating in bats for up to 70 years, say researchers

&Tab;&Tab;<div class&equals;"wpcnt">&NewLine;&Tab;&Tab;&Tab;<div class&equals;"wpa">&NewLine;&Tab;&Tab;&Tab;&Tab;<span class&equals;"wpa-about">Advertisements<&sol;span>&NewLine;&Tab;&Tab;&Tab;&Tab;<div class&equals;"u top&lowbar;amp">&NewLine;&Tab;&Tab;&Tab;&Tab;&Tab;&Tab;&Tab;<amp-ad width&equals;"300" height&equals;"265"&NewLine;&Tab;&Tab; type&equals;"pubmine"&NewLine;&Tab;&Tab; data-siteid&equals;"111265417"&NewLine;&Tab;&Tab; data-section&equals;"2">&NewLine;&Tab;&Tab;<&sol;amp-ad>&NewLine;&Tab;&Tab;&Tab;&Tab;<&sol;div>&NewLine;&Tab;&Tab;&Tab;<&sol;div>&NewLine;&Tab;&Tab;<&sol;div><p>The evolutionary history of the virus responsible for the Covid-19 pandemic has been circulating in bats for decades&comma; according to an international team of researchers&period;<&sol;p>&NewLine;<p>The scientists have traced back the origins of SARS-CoV-2&comma; with their findings having implications for preventing future pandemics from the same lineage&period;<&sol;p>&NewLine;<p><&excl;--Ads1--><&sol;p>&NewLine;<p>The team used three different approaches to identify and remove regions in the genome before reconstructing histories and comparing them to see which specific viruses have appeared in the past&period;<&sol;p>&NewLine;<p>They found the lineage of viruses that SARS-CoV-2 belongs to diverged from other bat viruses from about 40 to 70 years ago&period;<&sol;p>&NewLine;<blockquote><p>We should have been better prepared for a second SARS virus<&sol;p><&sol;blockquote>&NewLine;<p>David L Robertson&comma; professor of computational virology at the MRC-University of Glasgow Centre for Virus Research&comma; said the findings suggest &OpenCurlyDoubleQuote;other viruses that are capable of infecting humans are circulating in horseshoe bats in China”&period;<&sol;p>&NewLine;<p>He said&colon; &OpenCurlyDoubleQuote;SARS-CoV-2’s receptor-binding domain sequence has so far only been found in a few pangolin viruses&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;Furthermore&comma; the other key feature thought to be instrumental to SARS-CoV-2’s ability to infect humans – a polybasic cleavage site insertion in the Spike protein – has not yet been seen in another close bat relative of the SARS-CoV-2 virus&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;While it is possible that pangolins may have acted as an intermediate host facilitating transmission of SARS-CoV-2 to humans&comma; no evidence exists to suggest that pangolin infection is a requirement for bat viruses to cross into humans&period;”<&sol;p>&NewLine;<p>He explained&colon; &OpenCurlyDoubleQuote;Instead&comma; our research suggests that SARS-CoV-2 likely evolved the ability to replicate in the upper respiratory tract of both humans and pangolins&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;The key to successful surveillance is knowing which viruses to look for and prioritising those that can readily infect humans&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;We should have been better prepared for a second SARS virus&period;”<&sol;p>&NewLine;<p>Although SARS-CoV-2 is 96&percnt; similar to the RaTG13 coronavirus – sampled from a Rhinolophus affinis horseshoe bat in 2013 in Yunnan&comma; China – the team found it only diverged from that strand in 1969&period;<&sol;p>&NewLine;<p>The findings appear in Nature Microbiology with authors from institutes including Xi’an Jiaotong-Liverpool University in Suzhou&comma; China&semi; the University of Hong Kong&comma; the University of Texas at Arlington&comma; and the University of Edinburgh&period;<&sol;p>&NewLine;<p>It also comes the day after the UK’s first confirmed case of coronavirus in a pet cat – although evidence suggests it is not possible for felines to pass the virus on to humans&period;<&sol;p>&NewLine;<p>The team suggests preventing future pandemics will require better sampling within wild bats as well as human disease surveillance system&period;<&sol;p>&NewLine;<p><&excl;--Ads2--><&sol;p>&NewLine;<p>Maciej Boni&comma; associate professor of biology at Penn State&comma; warned the Covid-19 pandemic &OpenCurlyDoubleQuote;will not be our last”&period;<br &sol;>&NewLine;He said&colon; &OpenCurlyDoubleQuote;Coronaviruses have genetic material that is highly recombinant&comma; meaning different regions of the virus’s genome can be derived from multiple sources&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;This has made it difficult to reconstruct SARS-CoV-2’s origins – you have to identify all the regions that have been recombining and trace their histories&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;We put together a diverse team with expertise in recombination&comma; phylogenetic dating&comma; virus sampling&comma; and molecular and viral evolution&period;”<&sol;p>&NewLine;<p>He added&colon; &OpenCurlyDoubleQuote;We were too late in responding to the initial SARS-CoV-2 outbreak but this will not be our last coronavirus pandemic&period;<&sol;p>&NewLine;<p>&OpenCurlyDoubleQuote;A much more comprehensive and real-time surveillance system needs to be put in place to catch viruses like this when case numbers are still in the double digits&period;”<&sol;p>&NewLine;&Tab;&Tab;&Tab;<div style&equals;"padding-bottom&colon;15px&semi;" class&equals;"wordads-tag" data-slot-type&equals;"belowpost">&NewLine;&Tab;&Tab;&Tab;&Tab;<div id&equals;"atatags-dynamic-belowpost-68eccd748afd5">&NewLine;&Tab;&Tab;&Tab;&Tab;&Tab;<script type&equals;"text&sol;javascript">&NewLine;&Tab;&Tab;&Tab;&Tab;&Tab;&Tab;window&period;getAdSnippetCallback &equals; 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